1 The SAS System 08:15 Friday, November 23, 2001 NOTE: Copyright (c) 1999-2001 by SAS Institute Inc., Cary, NC, USA. NOTE: SAS (r) Proprietary Software Release 8.2 (TS2M0) Licensed to UNC-CHAPEL HILL-SYSTEMWIDE-T/R, Site 0039466002. NOTE: This session is executing on the WIN_PRO platform. NOTE: SAS initialization used: real time 4.17 seconds cpu time 0.12 seconds 1 TITLE1 "EXAMPLE1.SAS--Demonstrate simple LINMOD use"; 2 3 * Data are from Danford, Hughes, and McNee, *; 4 * "On the Analysis of Repeated Measurement Experiments," *; 5 * Biometrics, 16, 1960, pp. 547-565. *; 6 7 * 0. Define raw data file; 8 FILENAME IN01 "..\EXAMPLES\PAYNE.DAT"; 9 DATA PAYNE; 10 INFILE IN01; 11 INPUT @7 GROUP $ INIT SCORE2 SCORE4 SCORE6 SCORE8 SCORE10; 12 * Create indicator variables ; 13 CONTROL = (GROUP="1"); 14 LOW = (GROUP="2"); 15 MODERATE= (GROUP="3"); 16 HIGH = (GROUP="4"); 17 NOTE: The infile IN01 is: File Name=D:\PROGRAMS\LINMOD33\EXAMPLES\PAYNE.DAT, RECFM=V,LRECL=256 NOTE: 45 records were read from the infile IN01. The minimum record length was 31. The maximum record length was 31. NOTE: The data set WORK.PAYNE has 45 observations and 11 variables. NOTE: DATA statement used: real time 0.02 seconds cpu time 0.02 seconds 18 PROC PRINT DATA=PAYNE; 19 20 * 1. Define directory in which LINMOD source code has been stored; 21 %LET LMDIRECT = ..\SOURCE\ ; 22 23 * 2. Define SAS macro code needed; 24 %INCLUDE "&LMDIRECT.MACROLIB.MAC" / NOSOURCE2 ; 41 2 The SAS System 08:15 Friday, November 23, 2001 42 * 3. Reduce raw data to a TYPE=CORR file named _CORRDS_ 43 with characteristics required by LINMOD; 44 &PROCSSCP DATA=PAYNE ; NOTE: There were 45 observations read from the data set WORK.PAYNE. NOTE: The PROCEDURE PRINT printed page 1. NOTE: PROCEDURE PRINT used: real time 0.02 seconds cpu time 0.02 seconds 45 VAR CONTROL LOW MODERATE HIGH INIT 46 SCORE2 SCORE4 SCORE6 SCORE8 SCORE10; 47 48 * 4.1 Start IML with at least minimum space needed; 49 * Use SHOW SPACE statement and larger WORKSIZE, SYMSIZE values 50 to tune performance with bigger problems; NOTE: The data set WORK._CORRDS_ has 14 observations and 13 variables. NOTE: PROCEDURE CORR used: real time 0.01 seconds cpu time 0.01 seconds 51 PROC IML WORKSIZE=1000 SYMSIZE=1000; Worksize = 1024000 Symbol size = 1024000 NOTE: IML Ready 52 53 * 4.2 Initialize LINMOD IML code; 54 &LINMOD ; NOTE: Module _DEFOPT_ defined. NOTE: Module _EREXIT_ defined. NOTE: Module _FITMOD_ defined. NOTE: Module _GETCSS_ defined. NOTE: Module _INITL_ defined. NOTE: Module _MAKESS_ defined. NOTE: Module _NMLIST_ defined. NOTE: Module _PRPARM_ defined. NOTE: Module _PVTYPE_ defined. NOTE: Module _SCAN_ defined. NOTE: Module _SETOPT_ defined. NOTE: Module _TSTGLH_ defined. NOTE: Module _UNIREP_ defined. NOTE: Module _UNSCAN_ defined. NOTE: Module _ZPIVOT_ defined. NOTE: Module FITMODEL defined. NOTE: Module GETCORSS defined. NOTE: Module MAKESS defined. NOTE: Module SETOPT defined. 3 The SAS System 08:15 Friday, November 23, 2001 NOTE: Module TESTGLH defined. NOTE: Module NAMELIST defined. NOTE: Module UTREND defined. NOTE: Module UMEAN defined. NOTE: Module UPOLY1 defined. NOTE: Module UPOLY2 defined. 2304 2305 * 5. Retrieve the file _CORRDS_ created in Step 3 ; 2306 RUN GETCORSS; 2307 2308 * 6. Define the model and estimate primary parameters; 2309 INDVARS = { "CONTROL" "LOW" "MODERATE" "HIGH" "INIT" }; 2310 DEPVARS=NAMELIST("SCORE",2,10,2); 2311 *Last statement creates following matrix-- 2312 *DEPVARS = { "SCORE2" "SCORE4" "SCORE6" "SCORE8" "SCORE10" }; 2313 RUN FITMODEL; 2314 *RESET PRINT; 2315 * 7.1 Conduct a test (and estimation) step; 2316 NOTE={"* MANOVA Test of Main Effect of Treatment, *" 2317 , "* comparing each treatment group to the control group *" } ; 2318 PRINT ,NOTE ; 2319 C = { 1 -1 0 0 0 , 2320 1 0 -1 0 0 , 2321 1 0 0 -1 0 } ; 2322 THETARNM= { "C-LOW" "C-MOD" "C-HIGH" }; 2323 *U defaults to Identity matrix, if NROW(U)=0; 2324 RUN TESTGLH; 2325 2326 * 7.2 Conduct another test (and estimation) step; 2327 NOTE={"* Trends by Treatment Interaction, *" 2328 , "* comparing each treatment group to the control group *" } ; 2329 PRINT , NOTE ; 2330 *Re-use the same C matrix; 2331 *Note that all user inputs (C, U, THETA0, THETARNM, THETACNM, etc.) 2332 are never changed by LINMOD, and hence remain in existence; 2333 *May FREE THETACNM, for example, to avoid conflict 2334 between successive invocations of TSTGLH; 2335 TIMES ={2 4 6 8 10}; 2336 RUN UPOLY1(TIMES ,"Time", 2337 USCORE , SCORENM ); 2338 U = USCORE; 2339 THETACNM = SCORENM ; 2340 RUN TESTGLH; NOTE: Exiting IML. NOTE: The PROCEDURE IML printed pages 2-8. NOTE: PROCEDURE IML used: real time 0.33 seconds cpu time 0.30 seconds 4 The SAS System 08:15 Friday, November 23, 2001 NOTE: SAS Institute Inc., SAS Campus Drive, Cary, NC USA 27513-2414 NOTE: The SAS System used: real time 5.03 seconds cpu time 0.48 seconds